Table 3

Factor loadings of tumor profiles. (A) Male loadings, (B) female loadings. The factor loadings are the correlation coefficients between original variables (in this case tumour sites relative percentages) and components, so they help in the elucidation of the meaning of components. In this particular case the components correspond to specific sets of tumours whose relative abundance is correlated at the level of populations

APCM1PCM2PCM3PCM4PCM5
Lip−0.050 0.599 0.0070.1530.658
Tongue −0.906 0.1130.1230.0460.131
Saliv gland0.254−0.0750.1850.2050.192
Mouth −0.888 0.0340.1410.0360.062
Oropharynx −0.902 −0.1450.1720.044−0.056
Nasopharynx−0.224 0.740 −0.2690.3880.031
Hypopharynx −0.917 −0.2010.1020.0780.039
Pharynx unsp −0.692 0.1370.042−0.0920.217
Oesophagus −0.660 −0.3160.247−0.3620.051
Stomach0.2800.5760.1330.094−0.117
Small intest0.042−0.538−0.0370.4630.343
Colon0.164 −0.590 −0.475−0.175−0.281
Rectum−0.002−0.2530.209−0.384−0.146
Liver−0.2900.476−0.3630.454−0.232
Gall bladder0.2650.539−0.1540.392−0.277
Pancreas 0.748 0.0910.4230.020−0.252
Nose, sinuses−0.540−0.2700.1810.5170.001
Larynx−0.439 0.763 −0.1340.0880.149
Lung0.2330.4370.264−0.558−0.421
Other thorac−0.0350.3530.2800.090−0.420
Bone0.1540.505 0.585 0.0960.264
Conn tissue0.4080.0230.4530.0340.369
Melanoma0.482−0.5650.1130.1600.141
Breast−0.159−0.191−0.2130.367−0.332
Prostate−0.006 −0.790 0.0130.3440.310
Testis0.131−0.5720.4220.052−0.203
Penis0.0790.254−0.117−0.0900.377
Bladder0.0340.194 −0.765 0.0670.214
Kidney0.235−0.0970.261 0.644 −0.501
Eye0.078−0.214 0.732 0.0150.330
Brain0.5380.2880.0410.2700.177
Thyroid0.144−0.01960.010 0.796 0.001
Other endocrine0.2450.2580.004−0.076−0.183
Hodgkin's d0.2700.4100.4430.1540.035
non-H lym0.262 −0.582 −0.4960.0780.094
Mult myel 0.640 −0.326−0.477−0.0090.211
Lym leuk0.3370.2580.210−0.3270.240
Myel leuk0.516−0.026−0.263−0.2910.287
Oth leuk−0.2040.008−0.200−0.024−0.067
Leuk unsp0.300−0.2270.3490.4270.051
% exp var18.816.19.98.76.5
B PCF1 PCF2 PCF3 PCF4 PCF5
Lip 0.660 0.0790.0480.3320.251
Tongue−0.0220.5320.0870.1500.114
Saliv gland0.4570.233−0.246−0.3160.008
Mouth−0.1710.3310.185−0.0010.262
Oropharynx−0.1970.083 0.647 −0.186−0.337
Nasopharynx0.3890.3320.0230.043−0.057
Hypopharynx −0.727 −0.0250.2260.107−0.116
Pharynx unsp−0.492−0.274−0.0620.240−0.118
Oesophagus −0.647 −0.503−0.2530.1760.135
Stomach 0.564 −0.061−0.1810.251−0.097
Small intest−0.2150.3070.230−0.4090.425
Colon −0.588 0.3870.0000.0690.010
Rectum0.2570.070 0.598 0.246−0.094
Liver 0.684 0.357−0.427−0.162−0.235
Gall bladder 0.732 0.189−0.159−0.408−0.162
Pancreas0.244−0.244−0.417−0.3830.431
Nose, sinuses−0.213−0.0430.3240.370−0.002
Lung−0.152−0.423−0.171−0.264−0.241
Other thorac−0.476 −0.718 −0.382−0.1200.121
Bone0.501−0.142−0.093−0.421−0.067
Conn tissue 0.763 −0.1510.3300.2530.006
Melanoma0.5330.0920.4760.3050.007
Breast−0.3800.1930.443−0.061 0.598
Uterus unsp−0.5670.5470.2870.164−0.264
Cervix uteri0.0110.166−0.4790.022−0.276
Placenta0.517 −0.589 0.324−0.234−0.133
Corpus uteri0.487−0.2410.254−0.1340.115
Ovary 0.788 0.2470.326−0.084−0.039
Oth f gen0.404 −0.644 0.308−0.0280.239
Bladder0.4240.166−0.1840.0230.197
Kidney−0.503−0.012−0.4150.2120.283
Eye0.1210.1290.327 −0.780 0.158
Brain0.414−0.5030.2840.4630.240
Thyroid0.7090.203−0.302−0.1700.059
Oth endoc0.120 0.670 0.188−0.220−0.036
Hodgkin's d0.489−0.199−0.0340.3460.430
non-H lym 0.663 0.074−0.1300.227−0.210
Mult myel−0.472 0.699 0.0030.0590.122
Lym leuk−0.2190.526−0.4600.0770.406
Myel leuk0.5170.123−0.0100.4060.066
Oth leuk0.2780.197−0.3950.3020.139
Leuk unsp0.1260.4290.0760.226−0.041
% exp var22.311.99.47.45.6
  • Hodgkin's dis = Hodgkin's disease; non-H lym = non-Hodgkin's lymphoma; Mult myel = multiple myeloma; Lym leuk = lymphoid leukaemia; Myel leuk = myeloid leukaemia; Oth leuk = other leukaemias; Leuk unsp = leukaemia unspecified.